ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4wkcA1 - ECOD Domain | ECOD

ECOD/Domains/e4wkcA1

e4wkcA1

UID: 001680183

PDB

Range: A:1-232
PDB: 4WKC chain A(all domains)
UniProt: A7ZHQ1 (all domains)
Gene: mtnN

Molecule: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase

3D Structure

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Related Domains

Browse other domains in PNP_UDP_1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPhosphorylase/hydrolase-like(2011)

HH-groupPeptidyl-tRNA hydrolase-like(2011.2)

TT-groupPeptidyl-tRNA hydrolase-like(2011.2.1)

FFamilyPNP_UDP_1(2011.2.1.1)

Ligands

in contact, ≤ 4 Å

(3R,4S)-1-[(4-amino-5H-pyrrolo[3,2-d]pyrimidin-7-yl)methyl]-4-[(butylsulfanyl)methyl]pyrrolidin-3-olBIG
drugDrugBank DB07463

+ 1 additive (Tetraethylene glycol)

Tetraethylene glycolPG4

Shown in the structure viewer.

Pfam Families

PF01048PNP_UDP_1

Phosphorylase superfamily

ClanCL0408PUP

External Links

ECOD PDB View: 4WKC RCSB PDB: 4WKC PDBe: 4WKC UniProt: A7ZHQ1

Downloads

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Drug annotations from DrugDomain.