ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2vq2A1 - ECOD Domain | ECOD

ECOD/Domains/e2vq2A1

e2vq2A1

UID: 000168022

PDB

Range: A:32-251
PDB: 2VQ2 chain A(all domains)
UniProt: Q9JZ41 (all domains)
Gene: NMB1309

Molecule: PUTATIVE FIMBRIAL BIOGENESIS AND TWITCHING MOTILITY PROTEIN

3D Structure

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Related Domains

Browse other domains in TPR_8, TPR_16 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyTPR_8, TPR_16(109.4.1.1264)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Magnesium ionMG
metal
Sulfite ionSO3

Pfam Families

Tetratricopeptide repeat

ClanCL0020TPR

Tetratricopeptide repeat

ClanCL0020TPR

External Links

ECOD PDB View: 2VQ2 RCSB PDB: 2VQ2 PDBe: 2VQ2 UniProt: Q9JZ41

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.