ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4y28J1 - ECOD Domain | ECOD

ECOD/Domains/e4y28J1

e4y28J1

UID: 001680237

PDB

Range: J:2-42
PDB: 4Y28 chain J(all domains)
UniProt: D5MAL3 (all domains)
Gene: psaJ

Molecule: Photosystem I reaction center subunit IX

3D Structure

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Related Domains

Browse other domains in PSI_PsaJ →

Classification

AArchitectureextended segments(a.20)

XX-groupSubunit IX of photosystem I reaction centre, PsaJ(5021)

HH-groupSubunit IX of photosystem I reaction centre, PsaJ(5021.1)

TT-groupSubunit IX of photosystem I reaction centre, PsaJ(5021.1.1)

FFamilyPSI_PsaJ(5021.1.1.1)

Ligands

in contact, ≤ 4 Å

Beta caroteneBCR
drugDrugBank DB06755
Chlorophyll ACLA
drugDrugBank DB02133
Phylloquinone

Pfam Families

PF01701PSI_PsaJ

Photosystem I reaction centre subunit IX / PsaJ

External Links

ECOD PDB View: 4Y28 RCSB PDB: 4Y28 PDBe: 4Y28 UniProt: D5MAL3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

drugDrugBank DB01022

1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDELMG

Shown in the structure viewer. Drug annotations from DrugDomain.