ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5a09A1 - ECOD Domain | ECOD

ECOD/Domains/e5a09A1

e5a09A1

UID: 001680339

PDB

Range: A:16-243
PDB: 5A09 chain A(all domains)
UniProt: P08246 (all domains)
Gene: ELANE

Molecule: NEUTROPHIL ELASTASE

3D Structure

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Related Domains

Browse other domains in Trypsin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel 2(1.1.17)

FFamilyTrypsin(1.1.17.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141within 5 Å only
2-[(4R)-4-(4-cyanophenyl)-5-ethanoyl-6-methyl-2-oxidanylidene-1-[3-(trifluoromethyl)phenyl]-4H-pyrimidin-3-yl]ethanoic acidJJD

Shown in the structure viewer.

Pfam Families

PF00089Trypsin

Trypsin

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 5A09 RCSB PDB: 5A09 PDBe: 5A09 UniProt: P08246

Downloads

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Drug annotations from DrugDomain.