ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4r6aB2 - ECOD Domain | ECOD

ECOD/Domains/e4r6aB2

e4r6aB2

UID: 001680547

PDB

Range: B:459-816
PDB: 4R6A chain B(all domains)
UniProt: Q9NR97 (all domains)
Gene: TLR8

Molecule: Toll-like receptor 8

3D Structure

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Related Domains

Browse other domains in LRR_1,LRR_8 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupLeucine-rich repeats(207.1)

TT-groupLeucine-rich repeats(207.1.1)

FFamilyLRR_1,LRR_8(207.1.1.55)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
1-(4-amino-2-butyl-1H-imidazo[4,5-c]quinolin-1-yl)-2-methylpropan-2-olHB2

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Leucine Rich Repeat

ClanCL0022LRR

Leucine rich repeat

ClanCL0022LRR

External Links

ECOD PDB View: 4R6A RCSB PDB: 4R6A PDBe: 4R6A UniProt: Q9NR97

Downloads

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