ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5cd4U1 - ECOD Domain | ECOD

ECOD/Domains/e5cd4U1

e5cd4U1

UID: 001681350

PDB

Range: U:1-496
PDB: 5CD4 chain U(all domains)
UniProt: Q46901 (all domains)
Gene: casA

Molecule: CRISPR system Cascade subunit CasA

3D Structure

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Related Domains

Browse other domains in CRISPR_Cse1 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCas8-like(3576)

HH-groupCascade subunit CasA/Cse1/Cas8(3576.1)

TT-groupCascade subunit CasA/Cse1/Cas8(3576.1.1)

FFamilyCRISPR_Cse1(3576.1.1.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF09481CRISPR_Cse1

CRISPR-associated protein Cse1 (CRISPR_cse1)

External Links

ECOD PDB View: 5CD4 RCSB PDB: 5CD4 PDBe: 5CD4 UniProt: Q46901

Downloads

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