ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5cm7B1 - ECOD Domain | ECOD

ECOD/Domains/e5cm7B1

e5cm7B1

UID: 001681380

PDB

Range: B:2-140
PDB: 5CM7 chain B(all domains)
UniProt: A0A0D5YC82 (all domains)
Gene: thiL

Molecule: Thiamine-monophosphate kinase

3D Structure

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Related Domains

Browse other domains in AIRS →

Classification

AArchitecturea+b three layers(a.12)

XX-groupBacillus chorismate mutase-like(301)

HH-groupPurM N-terminal domain-like(301.2)

TT-groupPurM N-terminal domain-like(301.2.1)

FFamilyAIRS(301.2.1.1)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
Calcium ionCA
metal
Magnesium ion

Pfam Families

AIR synthase related protein, N-terminal domain

ClanCL0804PurM_N-like

External Links

ECOD PDB View: 5CM7 RCSB PDB: 5CM7 PDBe: 5CM7 UniProt: A0A0D5YC82

Downloads

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metal

Sodium ionNA

metal

Thiamine diphosphateTPP

Shown in the structure viewer. Drug annotations from DrugDomain.