ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5cm7B2 - ECOD Domain | ECOD

ECOD/Domains/e5cm7B2

e5cm7B2

UID: 001681381

PDB

Range: B:141-305
PDB: 5CM7 chain B(all domains)
UniProt: A0A0D5YC82 (all domains)
Gene: thiL

Molecule: Thiamine-monophosphate kinase

3D Structure

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Related Domains

Browse other domains in AIRS_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupPurM C-terminal domain-like(304.111)

TT-groupPurM C-terminal domain-like(304.111.1)

FFamilyAIRS_C(304.111.1.1)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
Calcium ionCA
metal
Magnesium ionMG
metal

Pfam Families

AIR synthase related protein, C-terminal domain

External Links

ECOD PDB View: 5CM7 RCSB PDB: 5CM7 PDBe: 5CM7 UniProt: A0A0D5YC82

Downloads

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Thiamine diphosphateTPP

Shown in the structure viewer. Drug annotations from DrugDomain.