ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5a5aA5 - ECOD Domain | ECOD

ECOD/Domains/e5a5aA5

e5a5aA5

UID: 001681822

PDB

Range: A:1047-1206
PDB: 5A5A chain A(all domains)
UniProt: Q2MGH6 (all domains)
Gene: SP_0368

Molecule: ENDO-ALPHA-N-ACETYLGALACTOSAMINIDASE

3D Structure

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Related Domains

Browse other domains in GH101_dom-5 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupGalactose-binding domain-like(10.32)

TT-groupGalactose-binding domain-like(10.32.1)

FFamilyGH101_dom-5(10.32.1.75)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 2 additives (Citric acid, 1,2-ETHANEDIOL)

Citric acidCIT
DrugBank DB04272
1,2-ETHANEDIOL

Pfam Families

PF21466GH101_dom-5

Endo-alpha-N-acetylgalactosaminidase, domain 5

ClanCL0202GBD

External Links

ECOD PDB View: 5A5A RCSB PDB: 5A5A PDBe: 5A5A UniProt: Q2MGH6

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.