ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5cd8C1 - ECOD Domain | ECOD

ECOD/Domains/e5cd8C1

e5cd8C1

UID: 001682148

PDB

Range: C:148-221
PDB: 5CD8 chain C(all domains)
UniProt: P25158 (all domains)
Gene: osk

Molecule: Maternal effect protein oskar

3D Structure

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Related Domains

Browse other domains in OST-HTH →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyOST-HTH(101.1.2.137)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF12872OST-HTH

OST-HTH/LOTUS domain

ClanCL0123HTH

External Links

ECOD PDB View: 5CD8 RCSB PDB: 5CD8 PDBe: 5CD8 UniProt: P25158

Downloads

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