ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5d69B2 - ECOD Domain | ECOD

ECOD/Domains/e5d69B2

e5d69B2

UID: 001682172

PDB

Range: B:173-268
PDB: 5D69 chain B(all domains)
UniProt: P04632 (all domains)
Gene: CAPNS1

Molecule: Calpain small subunit 1

3D Structure

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Related Domains

Browse other domains in EF-hand_5 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupEF-hand(108)

HH-groupEF-hand-related(108.1)

TT-groupEF-hand(108.1.1)

FFamilyEF-hand_5(108.1.1.26)

Ligands

in contact, ≤ 4 Å

(2E,2'Z)-2,2'-disulfanediylbis[3-(4-iodophenyl)prop-2-enoic acid]57T
Calcium ionCA
metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4

Pfam Families

PF13202EF-hand_5

EF hand

ClanCL0220EF_hand

External Links

ECOD PDB View: 5D69 RCSB PDB: 5D69 PDBe: 5D69 UniProt: P04632

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.