ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4bmkA1 - ECOD Domain | ECOD

ECOD/Domains/e4bmkA1

e4bmkA1

UID: 001682281

PDB

Range: A:22-60,A:316-420
PDB: 4BMK chain A(all domains)
UniProt: Q93UV0 (all domains)
Gene: spt

Molecule: SERINE PALMITOYLTRANSFERASE

3D Structure

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Related Domains

Browse other domains in Aminotran_1_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupC-terminal domain in some PLP-dependent transferases(3016)

HH-groupC-terminal domain in some PLP-dependent transferases(3016.1)

TT-groupC-terminal domain in some PLP-dependent transferases(3016.1.1)

FFamilyAminotran_1_2(3016.1.1.1)

Ligands

in contact, ≤ 4 Å

Decarboxylated MyriocinMYB

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00155Aminotran_1_2

Aminotransferase class I and II

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 4BMK RCSB PDB: 4BMK PDBe: 4BMK UniProt: Q93UV0

Downloads

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