ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4bmkB2 - ECOD Domain | ECOD

ECOD/Domains/e4bmkB2

e4bmkB2

UID: 001682284

PDB

Range: B:22-60,B:316-417
PDB: 4BMK chain B(all domains)
UniProt: Q93UV0 (all domains)
Gene: spt

Molecule: SERINE PALMITOYLTRANSFERASE

3D Structure

Loading viewer...

Related Domains

Browse other domains in Aminotran_1_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupC-terminal domain in some PLP-dependent transferases(3016)

HH-groupC-terminal domain in some PLP-dependent transferases(3016.1)

TT-groupC-terminal domain in some PLP-dependent transferases(3016.1.1)

FFamilyAminotran_1_2(3016.1.1.1)

Ligands

in contact, ≤ 4 Å

Decarboxylated MyriocinMYB
within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00155Aminotran_1_2

Aminotransferase class I and II

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 4BMK RCSB PDB: 4BMK PDBe: 4BMK UniProt: Q93UV0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure