ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4yklB2 - ECOD Domain | ECOD

ECOD/Domains/e4yklB2

e4yklB2

UID: 001683520

PDB

Range: B:33-196
PDB: 4YKL chain B(all domains)
UniProt: O74859 (all domains)
Gene: hnt3

Molecule: Aprataxin-like protein

3D Structure

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Related Domains

Browse other domains in HIT →

Classification

AArchitecturea+b three layers(a.12)

XX-groupHIT-like(312)

HH-groupHIT-related(312.1)

TT-groupHIT-related(312.1.1)

FFamilyHIT(312.1.1.2)

Ligands

in contact, ≤ 4 Å

GuanosineGMP
drugDrugBank DB02857
Chloride ionCL

+ 1 additive (Glycerin)

GlycerinGOL

Pfam Families

HIT domain

ClanCL0265HIT

External Links

ECOD PDB View: 4YKL RCSB PDB: 4YKL PDBe: 4YKL UniProt: O74859

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.