ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5bo8B1 - ECOD Domain | ECOD

ECOD/Domains/e5bo8B1

e5bo8B1

UID: 001683583

PDB

Range: B:90-380
PDB: 5BO8 chain B(all domains)
UniProt: O43173 (all domains)
Gene: ST8SIA3

Molecule: Sia-alpha-2,3-Gal-beta-1,4-GlcNAc-R:alpha 2,8-sialyltransferase

3D Structure

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Related Domains

Browse other domains in Glyco_transf_29 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupAlpha-2,3/8-sialyltransferase CstII-related(7555)

HH-groupAlpha-2,3/8-sialyltransferase CstII-related(7555.1)

TT-groupAlpha-2,3/8-sialyltransferase CstII-related(7555.1.1)

FFamilyGlyco_transf_29(7555.1.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

+ 1 additive (Citric acid)

Citric acidCIT
DrugBank DB04272

Shown in the structure viewer.

Pfam Families

PF00777Glyco_transf_29

Glycosyltransferase family 29 (sialyltransferase)

ClanCL0948GT29-like

External Links

ECOD PDB View: 5BO8 RCSB PDB: 5BO8 PDBe: 5BO8 UniProt: O43173

Downloads

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Drug annotations from DrugDomain.