ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4zl4B2 - ECOD Domain | ECOD

ECOD/Domains/e4zl4B2

e4zl4B2

UID: 001683601

PDB

Range: B:44-240
PDB: 4ZL4 chain B(all domains)
UniProt: Q6PRR9 (all domains)

Molecule: Aspartic protease PM5

3D Structure

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Related Domains

Browse other domains in TAXi_N →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupacid protease(1.1.1)

FFamilyTAXi_N(1.1.1.10)

Ligands

in contact, ≤ 4 Å

(2R)-1-[(2R)-2-(2-methoxyethoxy)propoxy]propan-2-amine4PF
N-[(benzyloxy)carbonyl]-O-carbamimidamido-L-homoseryl-N-{(3S,4S)-3-hydroxy-6-methyl-1-oxo-1-[(2-phenylethyl)amino]heptan-4-yl}-L-valinamide4PK

+ 2 additives (1,2-ETHANEDIOL, Sulfate ion)

1,2-ETHANEDIOL

Pfam Families

Xylanase inhibitor N-terminal

ClanCL0129Peptidase_AA

External Links

ECOD PDB View: 4ZL4 RCSB PDB: 4ZL4 PDBe: 4ZL4 UniProt: Q6PRR9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.