ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4udf5Q1 - ECOD Domain | ECOD

ECOD/Domains/e4udf5Q1

e4udf5Q1

UID: 001683656

PDB

Range: 5Q:1-183
PDB: 4UDF chain 5Q(all domains)
UniProt: Q66578 (all domains)

Molecule: Capsid protein VP3

3D Structure

Loading viewer...

Related Domains

Browse other domains in Rhv →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyRhv(10.2.1.1)

Pfam Families

picornavirus capsid protein

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 4UDF RCSB PDB: 4UDF PDBe: 4UDF UniProt: Q66578

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure