ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3dboB1 - ECOD Domain | ECOD

ECOD/Domains/e3dboB1

e3dboB1

UID: 000168393

PDB

Range: B:20-150
PDB: 3DBO chain B(all domains)
UniProt: P96917 (all domains)
Gene: vapC5

Molecule: Uncharacterized protein

3D Structure

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Related Domains

Browse other domains in PIN →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupPIN domain-like(2006.1.4)

FFamilyPIN(2006.1.4.2)

Ligands

in contact, ≤ 4 Å

MercaptoethanolBME
drugDrugBank DB03345
Sodium ionNA
metal

+ 1 additive (Acetate)

AcetateACT

Pfam Families

PIN domain

ClanCL0280PIN

External Links

ECOD PDB View: 3DBO RCSB PDB: 3DBO PDBe: 3DBO UniProt: P96917

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.