ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4xgrA1 - ECOD Domain | ECOD

ECOD/Domains/e4xgrA1

e4xgrA1

UID: 001683939

PDB

Range: A:0-131
PDB: 4XGR chain A(all domains)
UniProt: P9WF77 (all domains)
Gene: vapC30

Molecule: Ribonuclease VapC30

3D Structure

Loading viewer...

Related Domains

Browse other domains in PIN →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupPIN domain-like(2006.1.4)

FFamilyPIN(2006.1.4.2)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PIN domain

ClanCL0280PIN

External Links

ECOD PDB View: 4XGR RCSB PDB: 4XGR PDBe: 4XGR UniProt: P9WF77

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure