ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4zebB2 - ECOD Domain | ECOD

ECOD/Domains/e4zebB2

e4zebB2

UID: 001684012

PDB

Range: B:283-492
PDB: 4ZEB chain B(all domains)
UniProt: Q7D2F4 (all domains)

Molecule: ABC transporter, substrate binding protein (Agrocinopines A and B)

3D Structure

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Related Domains

Browse other domains in SBP_bac_5 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilySBP_bac_5(7523.1.1.3)

Ligands

in contact, ≤ 4 Å

alpha-L-arabinopyranoseARA

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00496SBP_bac_5

Bacterial extracellular solute-binding proteins, family 5 Middle

ClanCL0177PBP

External Links

ECOD PDB View: 4ZEB RCSB PDB: 4ZEB PDBe: 4ZEB UniProt: Q7D2F4

Downloads

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