ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3cpmA1 - ECOD Domain | ECOD

ECOD/Domains/e3cpmA1

e3cpmA1

UID: 000168447

PDB

Range: A:74-257
PDB: 3CPM chain A(all domains)
UniProt: Q9FUZ2 (all domains)
Gene: PDF1B

Molecule: Peptide deformylase, chloroplast

3D Structure

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Related Domains

Browse other domains in Pep_deformylase →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupPeptide deformylase(289)

HH-groupPeptide deformylase(289.1)

TT-groupPeptide deformylase(289.1.1)

FFamilyPep_deformylase(289.1.1.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01327Pep_deformylase

Polypeptide deformylase

External Links

ECOD PDB View: 3CPM RCSB PDB: 3CPM PDBe: 3CPM UniProt: Q9FUZ2

Downloads

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