ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5clqD1 - ECOD Domain | ECOD

ECOD/Domains/e5clqD1

e5clqD1

UID: 001684523

PDB

Range: D:22-152
PDB: 5CLQ chain D(all domains)
UniProt: P49792 (all domains)
Gene: RANBP2

Molecule: E3 SUMO-protein ligase RanBP2

3D Structure

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Related Domains

Browse other domains in Ran_BP1 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupPH domain-like(220)

HH-groupPH domain-like(220.1)

TT-groupPH domain-like(220.1.1)

FFamilyRan_BP1(220.1.1.4)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00638Ran_BP1

RanBP1 domain

ClanCL0266PH

External Links

ECOD PDB View: 5CLQ RCSB PDB: 5CLQ PDBe: 5CLQ UniProt: P49792

Downloads

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