ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ddgB1 - ECOD Domain | ECOD

ECOD/Domains/e5ddgB1

e5ddgB1

UID: 001684610

PDB

Range: B:3-149
PDB: 5DDG chain B(all domains)
UniProt: Q8AAV8 (all domains)
Gene: BT_0354

Molecule: transcriptional factor AraR

3D Structure

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Related Domains

Browse other domains in NUDIX →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupNudix(221.4)

TT-groupNudix(221.4.1)

FFamilyNUDIX(221.4.1.1)

Ligands

in contact, ≤ 4 Å

Malonic acidMLA
drugDrugBank DB02175

+ 1 additive (Formic acid)

Formic acidFMT
DrugBank DB01942

Shown in the structure viewer.

Pfam Families

NUDIX domain

ClanCL0261NUDIX

External Links

ECOD PDB View: 5DDG RCSB PDB: 5DDG PDBe: 5DDG UniProt: Q8AAV8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.