ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ym7AA2 - ECOD Domain | ECOD

ECOD/Domains/e4ym7AA2

e4ym7AA2

UID: 001684613

PDB

Range: AA:1-142,AA:174-267,AA:312-463
PDB: 4YM7 chain AA(all domains)
UniProt: P10964 (all domains)
Gene: RPA190

Molecule: DNA-directed RNA polymerase I subunit RPA190

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpb1_1 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupN-terminal domain in RNA-polymerase beta-prime subunit(4246)

HH-groupN-terminal domain in RNA-polymerase beta-prime subunit(4246.1)

TT-groupN-terminal domain in RNA-polymerase beta-prime subunit(4246.1.1)

FFamilyRNA_pol_Rpb1_1(4246.1.1.2)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF04997RNA_pol_Rpb1_1

RNA polymerase Rpb1, domain 1

External Links

ECOD PDB View: 4YM7 RCSB PDB: 4YM7 PDBe: 4YM7 UniProt: P10964

Downloads

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