ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5cvuA1 - ECOD Domain | ECOD

ECOD/Domains/e5cvuA1

e5cvuA1

UID: 001685181

PDB

Range: A:117-368
PDB: 5CVU chain A(all domains)
UniProt: O04385 (all domains)
Gene: IEMT1

Molecule: (Iso)eugenol O-methyltransferase

3D Structure

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Related Domains

Browse other domains in Methyltransf_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_2(2003.1.5.3)

Ligands

in contact, ≤ 4 Å

S-adenosyl-L-homocysteineSAH
drugDrugBank DB01752
4-[(1E)-3-hydroxyprop-1-en-1-yl]-2,6-dimethoxyphenol55B

+ 1 additive (Nitrate)

Nitrate

Pfam Families

PF00891Methyltransf_2

O-methyltransferase domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5CVU RCSB PDB: 5CVU PDBe: 5CVU UniProt: O04385

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14049

Shown in the structure viewer. Drug annotations from DrugDomain.