ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4dmrA2 - ECOD Domain | ECOD

ECOD/Domains/e4dmrA2

e4dmrA2

UID: 001685527

PDB

Range: A:54-148,A:369-624
PDB: 4DMR chain A(all domains)
UniProt: Q52675 (all domains)
Gene: dorA

Molecule: DMSO REDUCTASE

3D Structure

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Related Domains

Browse other domains in Molybdopterin →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupFormate dehydrogenase/DMSO reductase, domains 2 and 3(2003.2)

TT-groupFormate dehydrogenase/DMSO reductase, domains 2 and 3(2003.2.1)

FFamilyMolybdopterin(2003.2.1.1)

Ligands

in contact, ≤ 4 Å

MOLYBDENUM(IV) ION4MO
metal
Oxygen atomO
2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDEPGD

Pfam Families

PF00384Molybdopterin

Molybdopterin oxidoreductase

External Links

ECOD PDB View: 4DMR RCSB PDB: 4DMR PDBe: 4DMR UniProt: Q52675

Downloads

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+ 1 additive (Dimethyl sulfoxide)

Dimethyl sulfoxideDMS
DrugBank DB01093

Shown in the structure viewer. Drug annotations from DrugDomain.