ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2napA2 - ECOD Domain | ECOD

ECOD/Domains/e2napA2

e2napA2

UID: 001686277

PDB

Range: A:63-147,A:353-600
PDB: 2NAP chain A(all domains)
UniProt: P81186 (all domains)
Gene: napA

Molecule: PROTEIN (PERIPLASMIC NITRATE REDUCTASE)

3D Structure

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Related Domains

Browse other domains in Molybdopterin →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupFormate dehydrogenase/DMSO reductase, domains 2 and 3(2003.2)

TT-groupFormate dehydrogenase/DMSO reductase, domains 2 and 3(2003.2.1)

FFamilyMolybdopterin(2003.2.1.1)

Ligands

in contact, ≤ 4 Å

2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDEMGD
Molybdenum atomMO
metal

+ 1 additive (2-(N-morpholino)ethanesulfonic acid)

2-(N-morpholino)ethanesulfonic acid

Pfam Families

PF00384Molybdopterin

Molybdopterin oxidoreductase

External Links

ECOD PDB View: 2NAP RCSB PDB: 2NAP PDBe: 2NAP UniProt: P81186

Downloads

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DrugBank DB03814

Shown in the structure viewer. Drug annotations from DrugDomain.