ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2vyoA1 - ECOD Domain | ECOD

ECOD/Domains/e2vyoA1

e2vyoA1

UID: 000168631

PDB

Range: A:15-220
PDB: 2VYO chain A(all domains)
UniProt: Q8SU65 (all domains)
Gene: ECU11_0510

Molecule: POLYSACCHARIDE DEACETYLASE DOMAIN-CONTAINING PROTEIN ECU11_0510

3D Structure

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Related Domains

Browse other domains in Polysacc_deac_1 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupGlycoside hydrolase/deacetylase(2002.3)

TT-groupGlycoside hydrolase/deacetylase(2002.3.1)

FFamilyPolysacc_deac_1(2002.3.1.2)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Chloride ionCL
Zinc ionZN

Pfam Families

PF01522Polysacc_deac_1

Polysaccharide deacetylase

ClanCL0158GH_CE

External Links

ECOD PDB View: 2VYO RCSB PDB: 2VYO PDBe: 2VYO UniProt: Q8SU65

Downloads

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metal

+ 3 additives (Acetate, Imidazole, 1,2-ETHANEDIOL)

AcetateACT
DrugBank DB14511
ImidazoleIMD
DrugBank DB03366
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.