ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1ogyM4 - ECOD Domain | ECOD

ECOD/Domains/e1ogyM4

e1ogyM4

UID: 001686399

PDB

Range: M:12-67
PDB: 1OGY chain M(all domains)
UniProt: Q53176 (all domains)
Gene: napA

Molecule: PERIPLASMIC NITRATE REDUCTASE

3D Structure

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Related Domains

Browse other domains in Molybdop_Fe4S4 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFormate dehydrogenase/DMSO reductase, domain 1(1001)

HH-groupFormate dehydrogenase/DMSO reductase, domain 1(1001.1)

TT-groupFormate dehydrogenase/DMSO reductase, domain 1(1001.1.1)

FFamilyMolybdop_Fe4S4(1001.1.1.1)

Ligands

in contact, ≤ 4 Å

Ferroheme CHEC
drugDrugBank DB03317
2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDEMGD
Iron/sulfur cluster

Pfam Families

PF04879Molybdop_Fe4S4

Molybdopterin oxidoreductase Fe4S4 domain

ClanCL03444Fe-4S

External Links

ECOD PDB View: 1OGY RCSB PDB: 1OGY PDBe: 1OGY UniProt: Q53176

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.