ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5cvwA1 - ECOD Domain | ECOD

ECOD/Domains/e5cvwA1

e5cvwA1

UID: 001687100

PDB

Range: A:1529-1678
PDB: 5CVW chain A(all domains)
UniProt: J7QLC0 (all domains)
Gene: cya

Molecule: Bifunctional hemolysin/adenylate cyclase

3D Structure

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Related Domains

Browse other domains in HemolysinCabind,HCBP_related →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupSerralysin-like metalloprotease-C(207.6)

TT-groupSerralysin-like metalloprotease-C(207.6.1)

FFamilyHemolysinCabind,HCBP_related(207.6.1.2)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Magnesium ionMG
metal

+ 2 additives (Glycerin, 1,2-ETHANEDIOL)

Glycerin

Pfam Families

PF00353HemolysinCabind

RTX calcium-binding nonapeptide repeat (4 copies)

ClanCL0592beta_Roll

PF06594HCBP_related

Haemolysin-type calcium binding protein related domain

ClanCL0592beta_Roll

External Links

ECOD PDB View: 5CVW RCSB PDB: 5CVW PDBe: 5CVW UniProt: J7QLC0

Downloads

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DrugBank DB09462

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.