ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3dlcA1 - ECOD Domain | ECOD

ECOD/Domains/e3dlcA1

e3dlcA1

UID: 000168791

PDB

Range: A:0-218
PDB: 3DLC chain A(all domains)
UniProt: Q6LY14 (all domains)
Gene: MMP1179

Molecule: Putative S-adenosyl-L-methionine-dependent Methyltransferase

3D Structure

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Related Domains

Browse other domains in Methyltransf_11 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_11(2003.1.5.66)

Ligands

in contact, ≤ 4 Å

AdemetionineSAM
drugDrugBank DB00118

+ 2 additives (Acetate, Glycerin)

AcetateACT
DrugBank DB14511

Pfam Families

PF08241Methyltransf_11

Methyltransferase domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3DLC RCSB PDB: 3DLC PDBe: 3DLC UniProt: Q6LY14

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Glycerin

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.