ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5c6tA2 - ECOD Domain | ECOD

ECOD/Domains/e5c6tA2

e5c6tA2

UID: 001688016

PDB

Range: A:132-344
PDB: 5C6T chain A(all domains)
UniProt: P13201 (all domains)
Gene: gB

Molecule: Envelope glycoprotein B

3D Structure

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Related Domains

Browse other domains in Glycoprot_B_PH1 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupPH domain-like(220)

HH-groupfirst barrel domain in viral glycoproteins(220.3)

TT-groupfirst barrel domain in viral glycoproteins(220.3.1)

FFamilyGlycoprot_B_PH1(220.3.1.3)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF17416Glycoprot_B_PH1

Herpesvirus Glycoprotein B

ClanCL0266PH

External Links

ECOD PDB View: 5C6T RCSB PDB: 5C6T PDBe: 5C6T UniProt: P13201

Downloads

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