ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4rmnB2 - ECOD Domain | ECOD

ECOD/Domains/e4rmnB2

e4rmnB2

UID: 001688339

PDB

Range: B:412-524
PDB: 4RMN chain B(all domains)
UniProt: Q6NC13 (all domains)
Gene: badA

Molecule: Benzoate-coenzyme A ligase

3D Structure

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Related Domains

Browse other domains in AMP-binding_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-lytic protease prodomain-like(327)

HH-groupa+b domain in acetyl-CoA synthetase-like proteins(327.5)

TT-groupa+b domain in acetyl-CoA synthetase-like proteins(327.5.1)

FFamilyAMP-binding_C(327.5.1.2)

Ligands

in contact, ≤ 4 Å

THIOPHENE-2-CARBOXYLIC ACIDC21

+ 1 additive (Glycerol)

GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13193AMP-binding_C

AMP-binding enzyme C-terminal domain

ClanCL0531AMP-binding_C

External Links

ECOD PDB View: 4RMN RCSB PDB: 4RMN PDBe: 4RMN UniProt: Q6NC13

Downloads

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