ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2rknA1 - ECOD Domain | ECOD

ECOD/Domains/e2rknA1

e2rknA1

UID: 000168879

RepresentativePDB

Range: A:1-77
PDB: 2RKN chain A(all domains)
UniProt: Q8W453 (all domains)
Gene: DIR1

Molecule: DIR1 protein

3D Structure

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Related Domains

Browse other domains in LTP_2 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupBifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like(185)

HH-groupBifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA(185.1)

TT-groupBifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin(185.1.1)

FFamilyLTP_2(185.1.1.2)

Ligands

in contact, ≤ 4 Å

(7R)-4,7-DIHYDROXY-N,N,N-TRIMETHYL-10-OXO-3,5,9-TRIOXA-4-PHOSPHAHEPTACOSAN-1-AMINIUM 4-OXIDELP3
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Probable lipid transfer

ClanCL0482Prolamin

External Links

ECOD PDB View: 2RKN RCSB PDB: 2RKN PDBe: 2RKN UniProt: Q8W453

Downloads

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