ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2vwsA1 - ECOD Domain | ECOD

ECOD/Domains/e2vwsA1

e2vwsA1

UID: 000168894

PDB

Range: A:1-256
PDB: 2VWS chain A(all domains)
UniProt: P76469 (all domains)
Gene: rhmA

Molecule: YFAU, 2-KETO-3-DEOXY SUGAR ALDOLASE

3D Structure

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Related Domains

Browse other domains in HpcH_HpaI →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyHpcH_HpaI(2002.1.1.111)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, Phosphate ion)

GlycerinGOL
DrugBank DB09462
Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03328HpcH_HpaI

HpcH/HpaI aldolase/citrate lyase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 2VWS RCSB PDB: 2VWS PDBe: 2VWS UniProt: P76469

Downloads

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