ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4rupA1 - ECOD Domain | ECOD

ECOD/Domains/e4rupA1

e4rupA1

UID: 001692008

PDB

Range: A:154-190,A:251-452
PDB: 4RUP chain A(all domains)
UniProt: Q9PTN2 (all domains)
Gene: vdra

Molecule: Vitamin D3 receptor A

3D Structure

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Related Domains

Browse other domains in Hormone_recep →

Classification

AArchitecturealpha arrays(a.6)

XX-groupNuclear receptor ligand-binding domain(188)

HH-groupNuclear receptor ligand-binding domain(188.1)

TT-groupNuclear receptor ligand-binding domain(188.1.1)

FFamilyHormone_recep(188.1.1.1)

Ligands

in contact, ≤ 4 Å

(1R,3R,7E,17beta)-17-[(1R)-6,6,6-trifluoro-5-hydroxy-1-(4-hydroxy-4-methylpentyl)-5-(trifluoromethyl)hex-3-yn-1-yl]-9,10-secoestra-5,7-diene-1,3-diolH97

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00104Hormone_recep

Ligand-binding domain of nuclear hormone receptor

External Links

ECOD PDB View: 4RUP RCSB PDB: 4RUP PDBe: 4RUP UniProt: Q9PTN2

Downloads

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