ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5dmpA1 - ECOD Domain | ECOD

ECOD/Domains/e5dmpA1

e5dmpA1

UID: 001692496

PDB

Range: A:30-198
PDB: 5DMP chain A(all domains)
UniProt: D1Z0H7 (all domains)
Gene: MCP_2127

Molecule: Uncharacterized protein

3D Structure

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Related Domains

Browse other domains in LigD_N →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOncogene product-like(58)

HH-groupLigD phosphoesterase domain(58.2)

TT-groupLigD phosphoesterase domain(58.2.1)

FFamilyLigD_N(58.2.1.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
oxido(dioxo)vanadiumVN4

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Pfam Families

DNA Ligase D 3'-phosphoesterase domain

External Links

ECOD PDB View: 5DMP RCSB PDB: 5DMP PDBe: 5DMP UniProt: D1Z0H7

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.