ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4pa5B1 - ECOD Domain | ECOD

ECOD/Domains/e4pa5B1

e4pa5B1

UID: 001693489

PDB

Range: B:1-245
PDB: 4PA5 chain B(all domains)
UniProt: P40746 (all domains)
Gene: tgl

Molecule: Protein-glutamine gamma-glutamyltransferase

3D Structure

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Related Domains

Browse other domains in TGL →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyTGL(219.1.1.63)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 5 additives (Triethylene glycol, Sulfate ion, Citrate anion, …)

Triethylene glycolPGE
DrugBank DB02327
Sulfate ionSO4
DrugBank DB14546
Citrate anion

Pfam Families

Protein-glutamine gamma-glutamyltransferase

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 4PA5 RCSB PDB: 4PA5 PDBe: 4PA5 UniProt: P40746

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Tetraethylene glycolPG4

1,2-ETHANEDIOLEDO

within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.