ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5d5nB1 - ECOD Domain | ECOD

ECOD/Domains/e5d5nB1

e5d5nB1

UID: 001693530

RepresentativePDB

Range: B:59-289
PDB: 5D5N chain B(all domains)
UniProt: F5HFZ4 (all domains)
Gene: NEC1

Molecule: Virion egress protein UL31 homolog

3D Structure

Loading viewer...

Related Domains

Browse other domains in Herpes_UL31 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like(225)

HH-groupVirion egress protein UL31 homolog(225.3)

TT-groupVirion egress protein UL31 homolog(225.3.1)

FFamilyHerpes_UL31(225.3.1.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02718Herpes_UL31

Herpesvirus UL31-like protein

External Links

ECOD PDB View: 5D5N RCSB PDB: 5D5N PDBe: 5D5N UniProt: F5HFZ4

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure