ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4pi9A1 - ECOD Domain | ECOD

ECOD/Domains/e4pi9A1

e4pi9A1

UID: 001693576

PDB

Range: A:33-258
PDB: 4PI9 chain A(all domains)
UniProt: A0A0H3JT72 (all domains)
Gene: SAV2307

Molecule: Autolysin E

3D Structure

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Related Domains

Browse other domains in Glucosaminidase →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupLysozyme-like(235)

HH-groupLysozyme-like(235.1)

TT-groupLysozyme-like(235.1.1)

FFamilyGlucosaminidase(235.1.1.10)

Ligands

in contact, ≤ 4 Å

(4R)-4-[[(2S)-2-[[(2R)-2-[(2R,3S,4R,5R,6R)-5-acetamido-2-(hydroxymethyl)-3,6-bis(oxidanyl)oxan-4-yl]oxypropanoyl]amino]propanoyl]amino]-5-azanyl-5-oxidanylidene-pentanoic acid3LT
Chloride ionCL

+ 1 additive (Sulfate ion)

Sulfate ion

Pfam Families

PF01832Glucosaminidase

Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase

ClanCL0037Lysozyme

External Links

ECOD PDB View: 4PI9 RCSB PDB: 4PI9 PDBe: 4PI9 UniProt: A0A0H3JT72

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.