ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5aksA1 - ECOD Domain | ECOD

ECOD/Domains/e5aksA1

e5aksA1

UID: 001695309

PDB

Range: A:10-125
PDB: 5AKS chain A(all domains)
UniProt: P02766 (all domains)
Gene: TTR

Molecule: TRANSTHYRETIN

3D Structure

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Related Domains

Browse other domains in Transthyretin →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupPrealbumin-like(11.1.4)

FFamilyTransthyretin(11.1.4.1)

Ligands

in contact, ≤ 4 Å

Resveratrol-3-O-glucuronideR3X

+ 2 additives (Dimethyl sulfoxide, Sulfate ion)

Dimethyl sulfoxideDMS
DrugBank DB01093
Sulfate ionSO4

Pfam Families

PF00576Transthyretin

HIUase/Transthyretin family

ClanCL0287Transthyretin

External Links

ECOD PDB View: 5AKS RCSB PDB: 5AKS PDBe: 5AKS UniProt: P02766

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.