ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5c3oA1 - ECOD Domain | ECOD

ECOD/Domains/e5c3oA1

e5c3oA1

UID: 001695405

PDB

Range: A:1-94,A:117-295
PDB: 5C3O chain A(all domains)
UniProt: Q7RYZ9 (all domains)
Gene: NCU06416

Molecule: Thymine dioxygenase

3D Structure

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Related Domains

Browse other domains in 2OG-FeII_Oxy,DIOX_N →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamily2OG-FeII_Oxy,DIOX_N(10.12.1.17)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF031712OG-FeII_Oxy

2OG-Fe(II) oxygenase superfamily

ClanCL0029Cupin

non-haem dioxygenase in morphine synthesis N-terminal

ClanCL0029Cupin

External Links

ECOD PDB View: 5C3O RCSB PDB: 5C3O PDBe: 5C3O UniProt: Q7RYZ9

Downloads

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