ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5deqB1 - ECOD Domain | ECOD

ECOD/Domains/e5deqB1

e5deqB1

UID: 001695500

PDB

Range: B:3-149
PDB: 5DEQ chain B(all domains)
UniProt: Q8AAV8 (all domains)
Gene: BT_0354

Molecule: TRANSCRIPTIONAL REGULATOR AraR

3D Structure

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Related Domains

Browse other domains in NUDIX →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupNudix(221.4)

TT-groupNudix(221.4.1)

FFamilyNUDIX(221.4.1.1)

Ligands

in contact, ≤ 4 Å

alpha-L-arabinopyranoseARA

+ 1 additive (Formic acid)

Formic acidFMT
DrugBank DB01942

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

NUDIX domain

ClanCL0261NUDIX

External Links

ECOD PDB View: 5DEQ RCSB PDB: 5DEQ PDBe: 5DEQ UniProt: Q8AAV8

Downloads

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