ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3f6qB1 - ECOD Domain | ECOD

ECOD/Domains/e3f6qB1

e3f6qB1

UID: 000169633

PDB

Range: B:36-68
PDB: 3F6Q chain B(all domains)
UniProt: P48059 (all domains)
Gene: LIMS1

Molecule: LIM and senescent cell antigen-like-containing domain protein 1

3D Structure

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Related Domains

Browse other domains in LIM →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupGlucocorticoid receptor-like(377)

HH-groupLIM domain-like(377.1)

TT-groupLIM domain-like(377.1.1)

FFamilyLIM(377.1.1.5)

Ligands

in contact, ≤ 4 Å

Iodide ionIOD
Zinc ionZN
metal

+ 1 additive (Phosphate ion)

Phosphate ionPO4

Pfam Families

LIM domain

ClanCL0839Tbcl_zf

External Links

ECOD PDB View: 3F6Q RCSB PDB: 3F6Q PDBe: 3F6Q UniProt: P48059

Downloads

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DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.