ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4wmbA1 - ECOD Domain | ECOD

ECOD/Domains/e4wmbA1

e4wmbA1

UID: 001696816

PDB

Range: A:93-391
PDB: 4WMB chain A(all domains)
UniProt: Q3U4G3 (all domains)
Gene: Xxylt1

Molecule: Xyloside xylosyltransferase 1

3D Structure

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Related Domains

Browse other domains in Glyco_transf_8 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNucleotide-diphospho-sugar transferases(7516)

HH-groupNucleotide-diphospho-sugar transferases(7516.1)

TT-groupNucleotide-diphospho-sugar transferases(7516.1.1)

FFamilyGlyco_transf_8(7516.1.1.6)

Ligands

in contact, ≤ 4 Å

Uridine-5'-DiphosphateUDP
drugDrugBank DB03435
MANGANESE (II) IONMN
metal

+ 1 additive (Sulfate ion)

Pfam Families

PF01501Glyco_transf_8

Glycosyl transferase family 8

ClanCL0110GT-A

External Links

ECOD PDB View: 4WMB RCSB PDB: 4WMB PDBe: 4WMB UniProt: Q3U4G3

Downloads

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Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.