ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4zkyA1 - ECOD Domain | ECOD

ECOD/Domains/e4zkyA1

e4zkyA1

UID: 001698042

PDB

Range: A:4-142
PDB: 4ZKY chain A(all domains)
UniProt: A0R6F1 (all domains)
Gene: MSMEG_6526

Molecule: Pyridoxamine 5-phosphate oxidase

3D Structure

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Related Domains

Browse other domains in Putative_PNPOx →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel(1.1.5)

FFamilyPutative_PNPOx(1.1.5.8)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Iodide ionIOD
Sodium ionNA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01243PNPOx_N

Pyridoxamine 5'-phosphate oxidase

ClanCL0336FMN-binding

External Links

ECOD PDB View: 4ZKY RCSB PDB: 4ZKY PDBe: 4ZKY UniProt: A0R6F1

Downloads

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