ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5dmhA2 - ECOD Domain | ECOD

ECOD/Domains/e5dmhA2

e5dmhA2

UID: 001698426

PDB

Range: A:9-256
PDB: 5DMH chain A(all domains)
UniProt: Q0KBC8 (all domains)
Gene: otnK

Molecule: Uncharacterized protein conserved in bacteria

3D Structure

Loading viewer...

Related Domains

Browse other domains in SBD_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupYgbK-like(7589)

HH-groupYgbK-like(7589.1)

TT-groupYgbK-like(7589.1.1)

FFamilySBD_N(7589.1.1.1)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Sugar-binding N-terminal domain

External Links

ECOD PDB View: 5DMH RCSB PDB: 5DMH PDBe: 5DMH UniProt: Q0KBC8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure