ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4pvkA1 - ECOD Domain | ECOD

ECOD/Domains/e4pvkA1

e4pvkA1

UID: 001699102

PDB

Range: A:226-498
PDB: 4PVK chain A(all domains)
UniProt: B2ZWE9 (all domains)
Gene: phlp4

Molecule: Pollen allergen Phl p 4.0202

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupFAD-linked oxidases, C-terminal domain(304.6)

TT-groupFAD-linked oxidases, C-terminal domain(304.6.1)

FFamilyBBE(304.6.1.3)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
Chloride ionCL
Sodium ionNA

Pfam Families

Berberine and berberine like

ClanCL0277FAD-oxidase_C

External Links

ECOD PDB View: 4PVK RCSB PDB: 4PVK PDBe: 4PVK UniProt: B2ZWE9

Downloads

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metal

+ 1 additive (Malonate ion)

Malonate ionMLI

Shown in the structure viewer. Drug annotations from DrugDomain.