ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4rqeC2 - ECOD Domain | ECOD

ECOD/Domains/e4rqeC2

e4rqeC2

UID: 001699764

PDB

Range: C:141-474
PDB: 4RQE chain C(all domains)
UniProt: P49591 (all domains)
Gene: SARS1

Molecule: Serine--tRNA ligase, cytoplasmic

3D Structure

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Related Domains

Browse other domains in tRNA-synt_2b →

Classification

AArchitecturea+b three layers(a.12)

XX-groupClass II aaRS and biotin synthetases(314)

HH-groupClass II aaRS and biotin synthetases(314.1)

TT-groupClass II aaRS and biotin synthetases(314.1.1)

FFamilytRNA-synt_2b(314.1.1.2)

Ligands

in contact, ≤ 4 Å

SerineSER
drugDrugBank DB00133
Phosphoaminophosphonic acid-adenylate esterANP

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00587tRNA-synt_2b

tRNA synthetase class II core domain (G, H, P, S and T)

ClanCL0040tRNA_synt_II

External Links

ECOD PDB View: 4RQE RCSB PDB: 4RQE PDBe: 4RQE UniProt: P49591

Downloads

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