ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4rvyV1 - ECOD Domain | ECOD

ECOD/Domains/e4rvyV1

e4rvyV1

UID: 001699808

PDB

Range: V:1-137
PDB: 4RVY chain V(all domains)
UniProt: P0A386 (all domains)
Gene: psbV

Molecule: Cytochrome c-550

3D Structure

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Related Domains

Browse other domains in Cytochrom_C550 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupCytochrome c-like(107)

HH-groupCytochrome c(107.1)

TT-groupCytochrome c(107.1.1)

FFamilyCytochrom_C550(107.1.1.10)

Ligands

in contact, ≤ 4 Å

Digalactosyl Diacyl Glycerol (Dgdg)DGD
drugDrugBank DB03426
FerrohemeHEM
drugDrugBank DB18267

Pfam Families

PF14495Cytochrom_C550

Cytochrome c-550 domain

ClanCL0318Cytochrome-c

External Links

ECOD PDB View: 4RVY RCSB PDB: 4RVY PDBe: 4RVY UniProt: P0A386

Downloads

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Calcium ion

metalwithin 5 Å only

Chloride ionCL

within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.